• sunbet(中国)

    EMCCD Gain and Offset Calibration

    Joseph S Beckwith

    Published: 2024-02-02 DOI: 10.17504/protocols.io.kxygx3dpdg8j/v1
    AI 解读
    浏览 1361

    Abstract

    EMCCD Gain and Offset Calibration

    Steps

    EMGain 0 Camera gain and offset measurement protocol

    1.

    Place a lens tissue on the sample stage above the objective lens to serve as a diffuser.

    2.

    Acquire brightfield mode images from the microscope with a 100ms exposure time, capturing at least 500 frames consecutively under no light. Ensure EM Gain is off.

    3.

    Repeat step 2 with increasing exposure times (at least 5 times, including step 2).

    4.

    Save the images taken under different exposure times in the 'camera_calibration' folder in .tif format and prefix the file names with 'exposure_'. For instance, the first image captured under no light should be named '0_filename', and the second image taken with slightly increasing exposure should be named '1_filename'.

    5.

    EMGain on Camera gain and offset measurement protocol

    6.

    Acquire brightfield mode images from the microscope with a 100ms exposure time, capturing at least 500 frames consecutively under no light. Ensure EM Gain is set to the setting of interest ( e.g. 250).

    7.

    Repeat step 2 with increasing exposure times (at least 5 times, including step 2). Ensure no pixels are above/at saturation.

    8.

    Save the images taken under different exposure times in the 'camera_calibration_EMGain_N' folder in .tif format and prefix the file names with 'exposure_'. For instance, the first image captured under no light should be named '0_filename', and the second image taken with slightly increasing exposure should be named '1_filename'.

    Gain calculation

    9.

    Use the GDSC-SMLM plugin for imageJ to calculate gain at no gain, ("Mean-Variance Test") to calculate camera gain.Then, using this gain parameter, use the "Mean-Variance Test (EM-CCD)" function to calculate the overall game and offset.

    推荐阅读

    Nature Protocols
    Protocols IO
    Current Protocols
    扫码咨询