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      PCR mixture and condition (2X SUPERGREEN PCR MASTER MIX)

      Yin-Tse Huang

      Published: 2022-04-24 DOI: 10.17504/protocols.io.81wgb644qlpk/v2
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      Abstract

      PCR mixture and condition (2X SUPERGREEN PCR MASTER MIX)

      Steps

      For generic primers

      1.

      PCR mixture PCR condition for generic primers

      ABC
      ComponentVolumeFinal conc.
      Template (< 1 µg)X µL-
      Forward Primer (10 µM)1 µL0.4 µM
      Reverse Primer (10 µM)1 µL0.4 µM
      2x Master Mix12.5 µL-
      ddH20up to 25 µL-
      Total volume25 µL-
      2.

      PCR condition for generic primers

      ABCD
      StepTempSecCycle
      Initial denaturation95 ºC180
      Denaturation95 ºC3035 cycles
      Annealing53-58 ºC30
      Extension72 ºC60
      Final extension72 ºC210
      Preservation4 ºC∞

      For barcoded primers

      3.

      PCR mixture for barcoded primers

      ABC
      ComponentVolumeFinal conc.
      Template (< 1 µg)X µL-
      Forward Primer (10 µM)5 µL2 µM
      Reverse Primer (10 µM)5 µL2 µM
      2x Master Mix12.5 µL-
      ddH20up to 25 µL-
      Total volume25 µL-
      4.

      PCR condition for barcoded primers

      ABCD
      StepTempSecCycle
      Initial denaturation95 ºC180
      Denaturation98 ºC2035 cycles
      Annealing64 ºC
      Extension72 ºC
      Final extension72 ºC210
      PreservationPreservation4 ºC∞

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