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    Western Blotting

    Eric ECS Cordeiro-Spinetti

    Published: 2023-06-15 DOI: 10.17504/protocols.io.36wgq3rzklk5/v1
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    Abstract

    It's a classic

    Steps

    Before Starting

    1.

    Make RIPA buffer (to be used in 3 months after adding Nuclease)

    AB
    50mM Tris HCl, PH 7.45mL (1M stock)
    150mM NaCl5mL (3M stock)
    1% Triton X-100 or NP-401 mL
    0.1% SDS1mL (10% supply center solution)
    1mM EDTA0.2 mL (0.5M stock)
    10mM Naf0.042g (@L5P1 chemical room)
    0.5% Sodium deoxylcholate0.5g (@L5P1 chemical room)
    Add ddH2O to 100 mL
    Add PMSF [final] = 1mM and any other protease inhibitors immediately before use
    Add 1uL Pierce™ Universal Nuclease per 1mL
    2.

    SDS Running Buffer

    Cell lysis

    3.

    Trypsinize cells

    4.

    Wash pellet with PBS

    5.

    Remove all supernatant with micropipette

    6.

    Freeze pellet in liquid N2

    7.

    Thaw quickly at 37°C

    8.

    Resuspend cell pellet on buffer 100µL

    9.

    Vortex 0h 0m 15s

    10.

    Incubate on Ice 0h 20m 0s

    11.

    Vortex 0h 0m 15s

    12.

    Collect supernatant

    13.

    Centrifuge 10000 RPM for 0h 5m 0s

    Running, Transfer and Blot

    14.

    Collect supernatant without disturbing the pellet

    15.

    Quantify protein

    15.1.

    799 uL water + 1 uL lysate

    • 200 uL 5x Bradford reagent
    15.2.

    Read at 595 nm

    16.

    Load 50 µg of protein/well

    17.

    Loading buffer 50µL β-mercaptoethanol + 950µL 2x Laemli Buffer

    18.

    Water up to 15µL

    19.

    Boil at95°C before loading  0h 0m 15s

    20.

    Add 10µLof ladder (Precision Plus Protein - Dual Color Standards)

    21.

    Run at 120-150 volts 1h 0m 0s

    22.

    Activate PVDF membrane in methanol

    23.

    Soak filter paper in Towbin Buffer

    24.

    Equilibrate gel in Towbin buffer 0h 10m 0s

    25.

    Semi-dry transfer

    25.1.

    90' (<50KDa) or 120' (>50KDa)

    25.2.

    Mount sandwich (paper-membrane-gel-paper)

    25.3.

    45 mA/gel (constant current)

    26.

    Cut out LEFT UPPER corner of the membrane

    27.

    Block membrane with 5% BSA in PBS 0.1% Tween (PBST) for 0h 30m 0s

    28.

    Add primary antibody in BSA-PBST and incubate overnight 18h 0m 0s at 4°C

    29.

    Wash 3x with PBST for 0h 5m 0s

    30.

    Add HRP secondary antibody in BSA-PBST and incubate for1h 0m 0sat room temperature on a shaker

    31.

    Wash 3x with PBST for0h 5m 0s

    32.

    Add 500 µL ECL (enhanced chemilumescent) per membrane strip

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